-O0CFLAGS=`echo $CFLAGS | sed 's/-O[[0-9]] *//'`
-AC_SUBST([O0CFLAGS])
-O0CXXFLAGS=`echo $CXXFLAGS | sed 's/-O[[0-9]] *//'`
-AC_SUBST([O0CXXFLAGS])
-
+AC_SUBST([O0CFLAGS], [`echo $CFLAGS | sed 's/-O[[0-9]] *//'`])
+AC_SUBST([O0CXXFLAGS], [`echo $CXXFLAGS | sed 's/-O[[0-9]] *//'`])
+
+gt_JAVACOMP([1.3], [1.4])
+gt_JAVAEXEC
+
+# We use gnulib, but from lib/local.mk instead of lib/Makefile.am.
+# So prefix paths with lib/. See also etc/prefix-gnulib-mk.
+gl_LIBOBJS=`echo "$gl_LIBOBJS" | sed -e 's, , lib/,g'`
+# Listing the names of the variables to prefix is error-prone.
+# Rather, adjust all the AC_SUBST variables whose name ends in '_H',
+# and whose content ends in '.h'.
+for ac_var in $ac_subst_vars
+do
+ eval "ac_val=\$$ac_var"
+ case $ac_var=$ac_val in
+ (*_H=*.h) eval "$ac_var=lib/\$$ac_var";;
+ esac
+done